My favorites: {{currentFavorite}}







question toolbar

For additional search capabilities please use GOLD
Due to a planned NERSC power outage, JGI portals will be unavailable 6:00am PDT July 10-11:59pm PDT July 14. System Status updates available here. Sorry for the inconvenience.

Due to the emerging COVID-19 pandemic, JGI will not be accepting or processing any samples because of reduced onsite staffing until further notice.Please read more
question toolbar {{searchResults.total}} results found {{totalSelected}} selected
Close Table
  • Legend:
  • Mycocosm genome
  • IMG portal icon
  • Phytozome portal icon
  • Restricted to view icon
  • Group Genomes icon
LegendClose

Project identity

  • FD - Final Deliverable Project
  • SP - Sequencing Project information and data
  • AP - Analysis Project information and data

JGI sequenced data

  • MycoCosm Genome Portal - MycoCosm related genome/group resource and analysis tools
  • IMG icon - IMG related genome resource and analysis tools
  • Phytozome Genome Portal - Phytozome related genome resource and analysis tools

Non-public resource

  • Restricted to view icon - Non-public resource. Access can be restricted. For access information please email to Principal investigator

Group

  • Group Genomes icon - Proposal/Group of Projects
Please login Please login Please login
1) Choose your filter for files or skip this section
OR/AND
Please use regular expression!

Type .*\.gff to get all files that are ending with ".gff".
Type .*assembled.* to get files that have "assembled" in the name of the file.
Read more about patterns here
Selected file types: {{selectedTypesStr}}

2) Download files from the listed below portals

Portals: {{getPortalsInCart()}} Files: {{totalFileCount}} Size: {{totalDataSize}}
Delete record
Name
Name
Resources
JGI Info
JGI Info
Product
Product
Status
Contacts
Taxonomy
Other
Data
Delete record
Superseded by:
Download
Restricted access. Data is private.
Genome Portals:
Img taxon oid:
JGI Project Id:
JGI Project Id:
Related Projects:
Related Projects:
JGI Proposal Id: /
JGI Proposal Id:
Directory Number:
Release Date:
,
Project Status Date:
Proposal/FD PI:
Proposal PI:
{{getFdPrefix($index)}}PI:
{{getFdPrefix($index)}}Co-PIs:
Sample Contact:
Taxonomy:
NCBI Project Id:
Ecosystem:
Ecosystem Category:
Ecosystem Sub Type:
Ecosystem Type:
Specific Ecosystem:
Genbank Accession Id:
ENA Accession Id:
Lineage hit:
Lineage Taxonomy Id:
Genus:
Species:
Strain:
TaxonomyID for Sequencing Projects:
Short name:
Proposal Short name:
Proposal name:
Sample site:
Habitat:
Img submission id:
Superkingdom:
Scientific Program:
Funding Program:
Gold Id:
Group:
Files:
Size:
Searching for Projects
Downloading Files
Looking for Access
2 / 2

New Feature: "Bulk Downloads"

collect your favorite projects and download them in bulk with our new feature "CART". Ability to download files with Portal or via Globus.


What's New
My Favorites: New Feature - Based on Your Feedback

This feature allows to save your filtered search results to "My Favorites" and access it later. In addition, you can find under "My Favorites" link the list of your "Private Projects" as well as "All Projects" you have/had a special access to.

Download with Cart

A convenient way to collect projects/genomes/metagenomes of your interest and download all files associated with them in bulk.

Read more and provide your comments and suggestions for this feature to our team.

The "Tree of Life"

Please use our powerful search or go to the "Tree of Life" if it is the most convenient way for you to reach your genomes/projects.

Close
Explore other JGI Systems

Visit JGI Data Management & Analysis Systems for comparative analysis and annotation of all publicly available genomes.

Close
Please login in order to save your search queries and access them in your "Favorites".

Close