Cucumis sativus v1.0
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Status

v1.0
Genome
    Approximately 203Mb in 4219 scaffolds
    Scaffold N50 (L50) = 51 (993 Kbp)
    Contig N50 (L50) = 1476 (37.6 Kbp)
Loci
   21491 loci containing protein-coding transcripts
Transcripts
   32528 protein-coding transcripts

 

Collaborators

  • US Department of Energy Joint Genome Institute (JGI)
  • Jeffrey Palmer, Indiana University
  • Jason Affourtit, Chinnappa Kodira, James R. Knight, Brian A. Desany, Mohammed Mohiuddin, Gerald Irzyk, Cynthia Turcotte, and Pascal Bouffard (454); Tim T Harkins (Roche); Jason Miller, Sergey Koren, Brian Walenz, and Granger Sutton (JCVI); Therese Mitros and Dan Rokhsar (Berkeley and DOE JGI), and Yiqun Weng and Jack Staub (USDA).


Funding

This work was performed under the auspices of the US Department of Energy's Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence Berkeley National Laboratory under contract No. DE-AC02-05CH11231, Lawrence Livermore National Laboratory under Contract No. DE-AC52-07NA27344, and Los Alamos National Laboratory under contract No. DE-AC02-06NA25396.