PFAM Domains • Lobosporangium transversale NRRL 3116 v1.0
Annotations/GenomesBacci1Coere1Gloin1Lichy1Linpe1Lobtra1Marpt1Morel2Mucci2Phybl2Rambr1Rhimi1_1Rhimi_ATCC11559_1Umbra1TotalAnnotation Description
PFAMs
13,4785,76612,10410,4666,78610,4196,29610,1609,5849,2166,4508,6268,4788,515126,344
117 transmembrane receptor (rhodopsin family)
227 transmembrane receptor (Secretin family)
512543313277 transmembrane sweet-taste receptor of 3 GCPR
5336514540433747444840383740599ATPase family associated with various cellular activities (AAA)
6757426084664394524861343235775ABC transporter
124454746912478793ATP synthase alpha/beta family, nucleotide-binding domain
131218EGF-like domain
2515141914231519172117181718252Elongation factor Tu GTP binding domain
7513115111211126373513394231416Helix-loop-helix DNA-binding domain
41125777245Hsp20/alpha crystallin family
197371471671411121010109183Hsp70 protein
19112615119111314128131413189KH domain
11111111111112SH2 domain
8918286522272239413723484845552SH3 domain
11u-PAR/Ly-6 domain
1610101211141011111114111110162Actin
7120315121121959423712454664530Ankyrin repeat
15781181172112109999146ADP-ribosylation factor family
354927519638273312202023278Eukaryotic aspartyl protease
7349363577277676Cyclic nucleotide-binding domain
11Cystatin domain
21115Cytochrome b(C-terminal)/b6/petD
111137Cytochrome b/b6/petB
2113212311121122Cytochrome c
17331311111225Double-stranded RNA binding motif
541729441621443433525333134420EF hand
1112111111111144Fe-4S binding domain
212111111112Fibronectin type III domain
422222115Globin
205231271471413738111015196Glutathione S-transferase, C-terminal domain
6122121233233132Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
55793789612272816292818289Homeodomain
55Kazal-type serine protease inhibitor domain
11Laminin EGF domain
8436567555233365lactate/malate dehydrogenase, NAD binding domain
22Lectin C-type domain
21751575871716616168154Myosin head (motor domain)
85121916464278230415451353149816Cytochrome P450
358941,00927799176932022372201282102071653,475Protein kinase domain
2311819119141118168151516194Pyridine nucleotide-disulphide oxidoreductase
8221295925392241605430515139603Ras family
302173351822015183171620216Response regulator receiver domain
123624312524172RNase H
1376588109707566888897569698951,228RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
111339Reverse transcriptase (RNA-dependent DNA polymerase)
5233333532833248Copper/zinc superoxide dismutase (SODC)
1211222221311122Iron/manganese superoxide dismutases, alpha-hairpin domain
31722191018622162450151511266Subtilase family
66107462711181447288222247373Sugar (and other) transporter
181281412161219151315161413197Thioredoxin
11Thyroglobulin type-1 repeat
1214Trefoil (P-type) domain
51555272754251336158Trypsin
1346134646898886103Tubulin/FtsZ family, GTPase domain
16319von Willebrand factor type A domain
1743291127405033105140203498786691,286Zinc finger, C2H2 type
964657704625469645567604862796Zinc finger, C3HC4 type (RING finger)
188562189518457011231819329Zinc knuckle
7333263365255356Protein-tyrosine phosphatase
4930414554324352453334272771583short chain dehydrogenase
4615222819171430292322232234344Zinc-binding dehydrogenase
94565746105455681Thiolase, N-terminal domain
391224224232223281Beta-ketoacyl synthase, N-terminal domain
54446657443442622Fe-2S iron-sulfur cluster binding domain
11Papain family cysteine protease
3113131222122125Enolase, C-terminal TIM barrel domain
5218Cytochrome C and Quinol oxidase polypeptide I
11114Cytochrome C oxidase subunit II, periplasmic domain
137811787109108998124Glutamine amidotransferase class-I
15910131011101211159111011157TCP-1/cpn60 chaperonin family
1113ATP synthase A chain
9157141556255460Glutamine synthetase, catalytic domain
2111111211111116Triosephosphate isomerase
4920242634302435302619262525393E1-E2 ATPase
21132124131391414201014149209Core histone H2A/H2B/H3/H4
44Bacterial regulatory helix-turn-helix protein, lysR family
22212119Copper binding proteins, plastocyanin/azurin family
2133131311112629Alpha amylase, catalytic domain
1745144648473111310110Phorbol esters/diacylglycerol binding domain (C1 domain)
86885566856871096Bacterial transferase hexapeptide (six repeats)
64104474544444468tRNA synthetases class I (I, L, M and V)
181672110111015181814201816212Cyclin, N-terminal domain
2121213031112671Carboxylesterase family
54254444554544582DNA polymerase family B
8443233654344457ATP synthase subunit C
1111116Legume lectin domain
4122121142233230Peroxidase
12391812011460Beta-lactamase
1363222324111233C-5 cytosine-specific DNA methylase
112116NADH dehydrogenase
4918303922302035373414333029420Calcineurin-like phosphoesterase
5125182634644859Cellulase (glycosyl hydrolase family 5)
8676666666666687tRNA synthetases class II (D, K and N)
8034366637593762635442525445721Mitochondrial carrier protein
2715112119181517202013181815247Aminotransferase class I and II
14101013859813111010109140Phosphoribosyl transferase domain
11Sigma-54 interaction domain
151410151414121415147161811189Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11Ribosome inactivating protein
1112111121111116Phosphoglycerate kinase
3224121433234337Ribosomal protein S4/S9 N-terminal domain
4224232344244343Ribosomal protein S12/S23
325Bacterial regulatory helix-turn-helix proteins, AraC family
1111111122111116Chaperonin 10 Kd subunit
365273272973123229202019287C2 domain
8515297918231532444814535045550PH domain
48753262251528194263013260bZIP transcription factor
20812251714916151214121213199Aldehyde dehydrogenase family
9224208025232840464717523760591Fungal Zn(2)-Cys(6) binuclear cluster domain
6017294215241828413915373930434Cytochrome b5-like Heme/Steroid binding domain
2133131421111226Oxidoreductase molybdopterin binding domain
198141721101213161311131314194Oxidoreductase NAD-binding domain
2617192420221522202016222221286SNF2 family N-terminal domain
4225222243233339Ribosomal protein S7p/S5e
2619542318231925222018222220331Ubiquitin-conjugating enzyme
115610585788577698Isocitrate/isopropylmalate dehydrogenase
6234232354344449Ribosomal Proteins L2, RNA binding domain
113611Chitinase class I
5225222344344345Hsp90 protein
4222222336222236Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
2112111122122221Dihydrofolate reductase
111126Chitin recognition protein
4838153111161922386Cysteine-rich secretory protein family
5114111154234235Ribosomal protein S3, C-terminal domain
224Annexin
3126Eukaryotic-type carbonic anhydrase
88Bacterial regulatory proteins, luxR family
63353435643444572-oxoacid dehydrogenases acyltransferase (catalytic domain)
733232342233340Catalase
6112221432122332Disintegrin
20185310175574UDP-glucoronosyl and UDP-glucosyl transferase
8345443466255564Aminotransferase class-III
7224232344232343Ribosomal protein S19
1131111111111116DNA gyrase B
7232212163233340Thiamine pyrophosphate enzyme, central domain
4334333544333449Lyase
5333443433233346Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
112232222421Ferritin-like domain
4113121222122125Adenylate and Guanylate cyclase catalytic domain
2112111211111117ATP synthase delta (OSCP) subunit
1121111111111115Orotidine 5'-phosphate decarboxylase / HUMPS family
2111111111111115Indole-3-glycerol phosphate synthase
4114131333333235Pyruvate kinase, barrel domain
3615302911141115282012282618293Kinesin motor domain
4526373527292733393430373530464DnaJ domain
1714151414141414141414141413199Proteasome subunit
13321125722311447Major intrinsic protein
211111122221118ATP synthase
22Glycosyl hydrolase family 1
122282323863663663'5'-cyclic nucleotide phosphodiesterase
11Protease inhibitor/seed storage/LTP family
111113121122118Profilin
5234232345244245Ribosomal protein L22p/L17e
4224222333233338Ribosomal protein L14p/L23e
3113732318201431222310212020339Ubiquitin family
7358555764366676Cofilin/tropomyosin-type actin-binding protein
622623243354434914-3-3 protein
5325635443433252Alkaline phosphatase
4514225Zinc carboxypeptidase
42548291717917262019181828313Aldo/keto reductase family
3921513721191938232023333125400Myb-like DNA-binding domain
144510564710105677100Forkhead domain
11125Glycosyl hydrolases family 32 N-terminal domain
1111131111111116Ribosomal protein L16p/L10e
5224222244233340Ribosomal protein S14p/S29e
9327584966355779FKBP-type peptidyl-prolyl cis-trans isomerase
2112121212122121Glutathione peroxidase
512412353143337
21651727514615137111014171Flavodoxin
11Tropomyosin
1221232512311127Calreticulin family
71092450Common central domain of tyrosinase
94765941175654789Aminotransferase class-V
11Gram-negative porin
3112111231111120Ribonucleotide reductase, small chain
5237565141573956484739474745662DEAD/DEAH box helicase
99638688638561918174687778751,089Helicase conserved C-terminal domain
11Fructose-bisphosphate aldolase class-I
2131111111111117EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
5224232343233341Ribosomal protein L23
312311141111121Pyridoxal-dependent decarboxylase, C-terminal sheet domain
5214222335244342Ribosomal protein L5
6544545545433663Pyridoxal-dependent decarboxylase conserved domain
2122141212111122Citrate synthase, C-terminal domain
7566666666466682GHMP kinases N terminal domain
125711586811116888114Biotin carboxylase, N-terminal domain
1211111111111115Tryptophan synthase alpha chain
12979889910979911126Pyridoxal-phosphate dependent enzyme
112'Paired box' domain
2610141810151117231613202015228NUDIX domain
10566445476766682pfkB family carbohydrate kinase
55212975339Glycosyl hydrolases family 28
5222232243333238Ribosomal protein L3
6224232345244447Ribosomal protein L11, RNA binding domain
1361011786811114101010125Histidine phosphatase superfamily (branch 1)
11Chloramphenicol acetyltransferase
111111111111113Thymidylate synthase
114484546912576792ATP synthase alpha/beta chain, C terminal domain
13551661461312971298135Calponin homology (CH) domain
112Bacterial dnaA protein
1048952510126566593Glutamine amidotransferases class-II
3224432232233338Ribosomal protein S15
2163121422111229'Cold-shock' DNA-binding domain
784544436Thaumatin family
1111111111111114Fructose-1-6-bisphosphatase, N-terminal domain
5123131342133234Ribonucleotide reductase, all-alpha domain
7223222344233342Ribosomal protein S2
1432134444107299691SRF-type transcription factor (DNA-binding and dimerisation domain)
651424431828132436358393722406GATA zinc finger
3576191591237211915181825256Amino acid permease
9965101010106617668118Prolyl oligopeptidase family
6226121255144142Ribosomal protein L30p/L7e
666510691152345583Histidine phosphatase superfamily (branch 2)
2112111111111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
6446444665355668Aconitase family (aconitate hydratase)
11Glycosyl hydrolase family 10
44444453132543Glycosyl hydrolases family 17
5215132345233342Ribosomal protein S5, N-terminal domain
6514524264655358Nucleoside diphosphate kinase
7226182465234456Tetraspanin family
3123222233233233Ribosomal protein S10p/S20e
46915251213612222218201620256Arrestin (or S-antigen), N-terminal domain
1113111111111116Phosphoglucose isomerase
31211112122118Carbohydrate phosphorylase
4112121122222124SecY translocase
22Pili and flagellar-assembly chaperone, PapD N-terminal domain
1111111111111114Respiratory-chain NADH dehydrogenase, 49 Kd subunit
4224322434233341Ribosomal protein L6
6335334354755359Polyprenyl synthetase
1742123436117388896Hexokinase
94684941178377693Dynamin family
1111221211211118Biopterin-dependent aromatic amino acid hydroxylase
3112111122111119Transcription factor TFIID (or TATA-binding protein, TBP)
5155171755143454Rieske [2Fe-2S] domain
11Bacterial regulatory proteins, lacI family
22Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
2412413Proton-conducting membrane transporter
1577139991012107101110139Biotin-requiring enzyme
4112111122122223Phosphofructokinase
3212222322222229Ribosomal protein S17
2113124131122125Hydroxymethylglutaryl-coenzyme A reductase
9225333366166560FGGY family of carbohydrate kinases, N-terminal domain
44Hemocyanin, copper containing domain
3312112111117Sodium:dicarboxylate symporter family
44MerR family regulatory protein
17591491271014119121212153Enoyl-CoA hydratase/isomerase
5323232344244344Ribosomal protein S9/S16
3532435533222345Transcription factor TFIIB repeat
108510967694366796Cytidine and deoxycytidylate deaminase zinc-binding region
2131111312111120Molybdopterin oxidoreductase
2310815922716922118126178Chromo (CHRromatin Organisation MOdifier) domain
11111117Phosphatidylinositol-specific phospholipase C, Y domain
11121118Phosphatidylinositol-specific phospholipase C, X domain
6236252555355559D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
7316523254155352Malic enzyme, N-terminal domain
213PEP-utilising enzyme, mobile domain
11Bacterial regulatory proteins, gntR family
31221111321221236-phosphogluconate dehydrogenase, C-terminal domain
7138820218655355105Multicopper oxidase
11Granulin
26612165124168714131312164WW domain
3223232333333338Ribosomal RNA adenine dimethylase
2041201421711221611203541581621081571581452,282WD domain, G-beta repeat
11ATP synthase, Delta/Epsilon chain, long alpha-helix domain
11Calponin family repeat
52749657541033474Heavy-metal-associated domain
8335343465355461Adenylate kinase
2223232222222230Phosphoglucomutase/phosphomannomutase, C-terminal domain
5224232333233239Ribosomal protein S8
4233232343233340Ribosomal protein S11
1975127117913149151412154LIM domain
3253271314244445Regulator of chromosome condensation (RCC1) repeat
4234132342244341Ribosomal protein S13/S18
11
22111111111Tau and MAP protein, tubulin-binding repeat
44Fimbrial protein
112NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
4222222222222230chorismate binding enzyme
1534925268737758360s Acidic ribosomal protein
224CUB domain
4454444444444457Prenyltransferase and squalene oxidase repeat
17761469799115101010130Protein kinase C terminal domain
11Spectrin repeat
111121211111115Single-strand binding protein family
11Type II/IV secretion system protein
2111111111111115S-adenosylmethionine synthetase, N-terminal domain
2312411711161116201411181612238Bromodomain
33Bacterial regulatory proteins, tetR family
216920516618151611171612188Acyl-CoA dehydrogenase, C-terminal domain
2715232322221525262115222219297Ubiquitin carboxyl-terminal hydrolase
111111111111113Ribosomal protein L36
2121415314331343Ribonuclease T2 family
2956247757201414141412178HSF-type DNA-binding
2232222222222229SRP54-type protein, GTPase domain
311121112211118Urease alpha-subunit, N-terminal domain
78891231445714