Gilbertella persicaria var. persicaria CBS 190.32-T v1.0
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Annotations/GenomesBacci1Blatri1Gilper1Kircor1Mucci2Mycafr1Parpar1Rhich1Rhimi1_1Rhior3Thaele1Zyghet1TotalAnnotation Description
Merops
4222512643673042332653762532902943023,621
311824362416193520332331310Water nucleophile; water bound by two Asp from monomer or dimer; all endopeptidases, from eukaryote organisms, viruses or virus-like organisms
103344335444451Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on cytoplasmic side of cell membrane.
402626363523304529283431383Cysteine nucleophile; catalytic residues in the order Cys, His, Asn (or Asp) in sequence
65666658646569Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
16333222324242Cysteine nucleophile; catalytic residues in the order His, Glu (or Asp), Cys in sequence
1111111119Cysteine nucleophile; catalytic residues in the order Cys, His, His in sequence
21221112122219Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
9369737127137790Families of peptidase inhibitors not assigned to clans
11111211110
111115
1113
81321
1221112221116
52252231122431
11111211110Families of metallopeptidases not assigned to clans
262317192315202818182624257Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Glu, His or Asp
3114110Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HXXEH) and Glu
44444448444654Water nucleophile; water bound by two zinc ions ligated by Lys, Asp, Asp, Asp, Glu
151112121312121614131212154Water nucleophile; water bound by two cobalt or manganese ions ligated by Asp, Asp, His, Glu, Glu
167815119101411161012139Water nucleophile; water bound by two zinc ions ligated by His (or Asp), Asp, Glu, Asp (or Glu), His
1157812775647685Water nucleophile; water bound by two zinc ions ligated by His, His or Asp, Lys or Glu, His, His.
11132112112218Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Asp; membrane proteins with intramembrane active site.
745764510666571Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motif HSHP(X)9D)
11Asparagine nucleophile; catalytic residues in the order Asp, Asn in sequence; all self-processing endopeptidases
32331232112124Serine or cysteine nucleophile; catalytic residues in the order His, Asp, Ser (or Cys) in sequence; all endopeptidases
351816362319213117322025293Threonine, serine or cysteine nucleophile at the N-terminus of mature enzyme
443103335334449Serine or cysteine nucleophile; catalytic residues in the order Cys (or Ser), His, Glu in sequence.
11114Serine or threonine nucleophile; N-terminal nucleophile
22151112108111511181114158Serine nucleophile; catalytic residues in the order Asp, His, Ser in sequence in family S8, but family S53 differs
965051926749617046536769771Serine nucleophile; catalytic residues in the order Ser, Asp, His in sequence
112111121112Serine nucleophile; catalytic residues in the order Ser, Lys (within the motif SXXK) in sequence
74455577627867Serine nucleophile; catalytic residues in the order Ser, Lys (or His) in sequence
314Serine nucleophile; catalytic residues in the order Ser, Lys in sequence
22113211111117Serine nucleophile; catalytic residues in the order Ser, His, Asp in sequence
111687649645572Serine nucleophile; transmembrane protein with catalytic residues in the order Ser, His embedded in the membrane
12115Families of peptidases of unknown catalytic mechanism not assigned to clans
262220242425202424232015267
21131112111116
11
11
11
11