Peptidases • Linderina pennispora ATCC 12442 v1.0
Annotations/GenomesBatde5Catan1Coere1Conco1Enccu1Gloin1Linpe1Marpt1Monbr1Morel1Mucci2Neucr2Phybl2PirE2_1Rambr1Rhior3Rozal1_1Schco3TotalAnnotation Description
Merops
314204439403072722553042422843953692901433454,203
10342124624192871233729290Water nucleophile; water bound by two Asp from monomer or dimer; all endopeptidases, from eukaryote organisms, viruses or virus-like organisms
13217Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on periplasmic side of cell membrane.
114314542143235Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on cytoplasmic side of cell membrane.
19202243129163516291622281720324Cysteine nucleophile; catalytic residues in the order Cys, His, Asn (or Asp) in sequence
345143563713843574Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
221132521332229Cysteine nucleophile; catalytic residues in the order His, Glu (or Asp), Cys in sequence
11111128Cysteine nucleophile; catalytic residues in the order Glu, Cys, His in sequence
22Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
11125Cysteine nucleophile; catalytic residues in the order Cys, His, His in sequence
121211210Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
213Water nucleophile; water bound by Gln and Glu; all endopeptidases
112Water nucleophile; water bound by Glu; all self-cleaving endopeptidases
54755373663134273Families of peptidase inhibitors not assigned to clans
11
11314
11
11
12115
11
111113112214
115121112722
112
11111112181322Families of metallopeptidases not assigned to clans
35182932029282312176619181222351Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Glu, His or Asp
13022152254Water nucleophile; water bound by single zinc ion ligated to His, Glu (within the motif HXXE) and His
2415332261130Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HXXEH) and Glu
2321755434442248Water nucleophile; water bound by two zinc ions ligated by Lys, Asp, Asp, Asp, Glu
78817871310126913610125Water nucleophile; water bound by two cobalt or manganese ions ligated by Asp, Asp, His, Glu, Glu
11104012171211141562216423213Water nucleophile; water bound by two zinc ions ligated by His (or Asp), Asp, Glu, Asp (or Glu), His
455876121091741290Water nucleophile; water bound by two zinc ions ligated by His, His or Asp, Lys or Glu, His, His.
111211119Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Asp; membrane proteins with intramembrane active site.
112Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motifs HXXXD and HXH)
63414446455661564Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motif HSHP(X)9D)
1113Asparagine nucleophile; catalytic residues in the order Asp, Asn in sequence; all self-processing endopeptidases
11Asparagine nucleophile; all self-processing endopeptidases
914751223251113711200Serine or cysteine nucleophile; catalytic residues in the order His, Asp, Ser (or Cys) in sequence; all endopeptidases
151824152721212323171520321422307Threonine, serine or cysteine nucleophile at the N-terminus of mature enzyme
5426543231836759Serine or cysteine nucleophile; catalytic residues in the order Cys (or Ser), His, Glu in sequence.
516Cysteine nucleophile at the N-terminus of mature enzyme; catalytic residues in the order Cys, Thr, His
111216Serine or threonine nucleophile; N-terminal nucleophile
2446217441081938431856226Serine nucleophile; catalytic residues in the order Asp, His, Ser in sequence in family S8, but family S53 differs
4449903786166677155127625323132981Serine nucleophile; catalytic residues in the order Ser, Asp, His in sequence
1321518333Serine nucleophile; catalytic residues in the order Ser, Lys (within the motif SXXK) in sequence
551017365242723365Serine nucleophile; catalytic residues in the order Ser, Lys (or His) in sequence
11Serine nucleophile; catalytic residues in the order Ser, Lys in sequence
1121113131111119Serine nucleophile; catalytic residues in the order Ser, His, Asp in sequence
1214Serine nucleophile; catalytic residues in the order His, Ser within the motif HXS.
3153327474445456Serine nucleophile; transmembrane protein with catalytic residues in the order Ser, His embedded in the membrane
112Families of peptidases of unknown catalytic mechanism not assigned to clans
11111121211114
24141751715152413263416232112276
21115
1113
1225