Phytophthora ramorum v1.1
Annotations/GenomesPhyra1_1Physo1_1TotalAnnotation Description
Merops
427427
112112Water nucleophile; water bound by two Asp from monomer or dimer; all endopeptidases, from eukaryote organisms, viruses or virus-like organisms
33Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on cytoplasmic side of cell membrane.
2929Cysteine nucleophile; catalytic residues in the order Cys, His, Asn (or Asp) in sequence
22Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
33Cysteine nucleophile; catalytic residues in the order His, Glu (or Asp), Cys in sequence
1010Families of peptidase inhibitors not assigned to clans
11
33
55
11
1212Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Glu, His or Asp
22Water nucleophile; water bound by single zinc ion ligated to His, Glu (within the motif HXXE) and His
55Water nucleophile; water bound by two zinc ions ligated by Lys, Asp, Asp, Asp, Glu
1010Water nucleophile; water bound by two cobalt or manganese ions ligated by Asp, Asp, His, Glu, Glu
1010Water nucleophile; water bound by two zinc ions ligated by His (or Asp), Asp, Glu, Asp (or Glu), His
77Water nucleophile; water bound by two zinc ions ligated by His, His or Asp, Lys or Glu, His, His.
44Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motif HSHP(X)9D)
22Asparagine nucleophile; catalytic residues in the order Asp, Asn in sequence; all self-processing endopeptidases
2929Serine or cysteine nucleophile; catalytic residues in the order His, Asp, Ser (or Cys) in sequence; all endopeptidases
2323Threonine, serine or cysteine nucleophile at the N-terminus of mature enzyme
88Serine or cysteine nucleophile; catalytic residues in the order Cys (or Ser), His, Glu in sequence.
11Serine or threonine nucleophile; N-terminal nucleophile
55Serine nucleophile; catalytic residues in the order Asp, His, Ser in sequence in family S8, but family S53 differs
118118Serine nucleophile; catalytic residues in the order Ser, Asp, His in sequence
11Serine nucleophile; catalytic residues in the order Ser, Lys (within the motif SXXK) in sequence
44Serine nucleophile; catalytic residues in the order Ser, Lys (or His) in sequence
11Serine nucleophile; catalytic residues in the order Ser, Lys in sequence
22Serine nucleophile; catalytic residues in the order Ser, His, Asp in sequence
11Serine nucleophile; catalytic residues in the order Ser, Glu, His
33Serine nucleophile; transmembrane protein with catalytic residues in the order Ser, His embedded in the membrane
1010