Radiomyces spectabilis NRRL 2753 v1.0
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Annotations/GenomesAbsrep1Bacci1Blatri1Hesve2finisherSCLiccor1Lichy1Mucci2Mycafr1Parpar1Phybl2Radspe1Rhich1Rhimi1_1Rhimi_ATCC11559_1Rhimi_ATCC52814_1Rhior3Synrac1Thaele1Umbra1Zyghet1TotalAnnotation Description
Merops
3424222512833053113042332652842643762532382322902832942723025,804
2631182626252416192819352020203320232231482Water nucleophile; water bound by two Asp from monomer or dimer; all endopeptidases, from eukaryote organisms, viruses or virus-like organisms
11Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on periplasmic side of cell membrane.
41036634334354344443484Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on cytoplasmic side of cell membrane.
3540262732353523302931452930282831342431623Cysteine nucleophile; catalytic residues in the order Cys, His, Asn (or Asp) in sequence
66544566575864646625106Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
2163311222313221242254Cysteine nucleophile; catalytic residues in the order His, Glu (or Asp), Cys in sequence
112Cysteine nucleophile; catalytic residues in the order Glu, Cys, His in sequence
11112211111112118Cysteine nucleophile; catalytic residues in the order Cys, His, His in sequence
21121112121112121225Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
9935877376612777136767142Families of peptidase inhibitors not assigned to clans
11
111211119
1111116
11
113212212
88
212211111222112311128
3522332231311112421446
111111111112111111120Families of metallopeptidases not assigned to clans
1726231216162315201717281815151815262224383Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Glu, His or Asp
22Water nucleophile; water bound by single zinc ion ligated to His, Glu (within the motif HXXE) and His
1311411113Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HXXEH) and Glu
4443454443384444443683Water nucleophile; water bound by two zinc ions ligated by Lys, Asp, Asp, Asp, Glu
151511119111312121212161411121311121112245Water nucleophile; water bound by two cobalt or manganese ions ligated by Asp, Asp, His, Glu, Glu
17167111917119101510141111101614101712257Water nucleophile; water bound by two zinc ions ligated by His (or Asp), Asp, Glu, Asp (or Glu), His
131158771277955654487106146Water nucleophile; water bound by two zinc ions ligated by His, His or Asp, Lys or Glu, His, His.
111111211112111112223Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Asp; membrane proteins with intramembrane active site.
774333645541065663625100Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motif HSHP(X)9D)
11Asparagine nucleophile; catalytic residues in the order Asp, Asn in sequence; all self-processing endopeptidases
532221231221111123136Serine or cysteine nucleophile; catalytic residues in the order His, Asp, Ser (or Cys) in sequence; all endopeptidases
3335182120202319211719311719193220201825447Threonine, serine or cysteine nucleophile at the N-terminus of mature enzyme
4443353333253223243465Serine or cysteine nucleophile; catalytic residues in the order Cys (or Ser), His, Glu in sequence.
1111116Serine or threonine nucleophile; N-terminal nucleophile
122215714151081119151511881811111014254Serine nucleophile; catalytic residues in the order Asp, His, Ser in sequence in family S8, but family S53 differs
85965080778267496155597046524853766771691,313Serine nucleophile; catalytic residues in the order Ser, Asp, His in sequence
11243111121111122Serine nucleophile; catalytic residues in the order Ser, Lys (within the motif SXXK) in sequence
47447455744765523738101Serine nucleophile; catalytic residues in the order Ser, Lys (or His) in sequence
314Serine nucleophile; catalytic residues in the order Ser, Lys in sequence
222213213111121112130Serine nucleophile; catalytic residues in the order Ser, His, Asp in sequence
911197676475965447545121Serine nucleophile; transmembrane protein with catalytic residues in the order Ser, His embedded in the membrane
2121111110Families of peptidases of unknown catalytic mechanism not assigned to clans
2126222320232425202627242420172323201715440
12112111112111111121
11
11311119
11
112