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Help Home > Alignment Search > Running an Alignment Search

Running an Alignment Search

The Query Page of the Alignment Search Tool allows you to construct your search using the following four panels:

BLAST query page panel header: query sequences

BLAST query page panel header: search criteria

BLAST query page panel header: program settings

BLAST query page panel header: organisms

Each of these panels can be collapsed or expanded by clicking on the panel title.

Quick Tips

If you are logged in as a registered JGI user when using BLAST, all of the settings in the Query Page will be remembered the next time you visit the site!