| KEGG Metabolic Pathways |
models in
Neocallimastix californiae G1 v1.0
FilteredModels5
(ver 1) |
| Amino Acid Metabolism |
418 |
| Alanine, aspartate and glutamate metabolism |
58 |
| Arginine and proline metabolism |
56 |
| Cysteine and methionine metabolism |
84 |
| Glycine, serine and threonine metabolism |
57 |
| Histidine metabolism |
53 |
| Lysine biosynthesis |
49 |
| Lysine degradation |
63 |
| Phenylalanine metabolism |
32 |
| Phenylalanine, tyrosine and tryptophan biosynthesis |
26 |
| Tryptophan metabolism |
54 |
| Tyrosine metabolism |
54 |
| Valine, leucine and isoleucine biosynthesis |
49 |
| Valine, leucine and isoleucine degradation |
11 |
| Biosynthesis of Polyketides and Nonribosomal Peptides |
63 |
| Biosynthesis of 12-, 14- and 16-membered macrolides |
0 |
| Biosynthesis of ansamycins |
3 |
| Biosynthesis of siderophore group nonribosomal peptides |
25 |
| Biosynthesis of type II polyketide backbone |
24 |
| Biosynthesis of type II polyketide products |
9 |
| Biosynthesis of vancomycin group antibiotics |
2 |
| Nonribosomal peptide structures |
0 |
| Polyketide sugar unit biosynthesis |
2 |
| Type I polyketide structures |
0 |
| Biosynthesis of Secondary Metabolites |
203 |
| Acridone alkaloid biosynthesis |
0 |
| Anthocyanin biosynthesis |
58 |
| Benzoxazinoid biosynthesis |
17 |
| beta-Lactam resistance |
0 |
| Betalain biosynthesis |
42 |
| Brassinosteroid biosynthesis |
1 |
| Caffeine metabolism |
0 |
| Carotenoid biosynthesis |
66 |
| Clavulanic acid biosynthesis |
0 |
| Diterpenoid biosynthesis |
24 |
| Flavone and flavonol biosynthesis |
19 |
| Flavonoid biosynthesis |
35 |
| Glucosinolate biosynthesis |
15 |
| Indole alkaloid biosynthesis |
0 |
| Insect hormone biosynthesis |
31 |
| Isoflavonoid biosynthesis |
0 |
| Isoquinoline alkaloid biosynthesis |
59 |
| Limonene and pinene degradation |
46 |
| Monoterpenoid biosynthesis |
0 |
| Novobiocin biosynthesis |
7 |
| Penicillin and cephalosporin biosynthesis |
0 |
| Phenylpropanoid biosynthesis |
52 |
| Puromycin biosynthesis |
11 |
| Sesquiterpenoid biosynthesis |
0 |
| Stilbenoid, diarylheptanoid and gingerol biosynthesis |
59 |
| Streptomycin biosynthesis |
18 |
| Terpenoid backbone biosynthesis |
10 |
| Tetracycline biosynthesis |
0 |
| Tropane, piperidine and pyridine alkaloid biosynthesis |
25 |
| Zeatin biosynthesis |
3 |
| Carbohydrate Metabolism |
816 |
| Amino sugar and nucleotide sugar metabolism |
156 |
| Ascorbate and aldarate metabolism |
37 |
| Butanoate metabolism |
50 |
| C5-Branched dibasic acid metabolism |
9 |
| Citrate cycle (TCA cycle) |
38 |
| Fructose and mannose metabolism |
73 |
| Galactose metabolism |
57 |
| Glycolysis / Gluconeogenesis |
68 |
| Glyoxylate and dicarboxylate metabolism |
17 |
| Inositol phosphate metabolism |
147 |
| Pentose and glucuronate interconversions |
143 |
| Pentose phosphate pathway |
92 |
| Propanoate metabolism |
10 |
| Pyruvate metabolism |
64 |
| Starch and sucrose metabolism |
139 |
| Energy Metabolism |
153 |
| Carbon fixation in photosynthetic organisms |
38 |
| Methane metabolism |
7 |
| Nitrogen metabolism |
25 |
| Oxidative phosphorylation |
50 |
| Photosynthesis |
34 |
| Photosynthesis - antenna proteins |
1 |
| Reductive carboxylate cycle (CO2 fixation) |
27 |
| Sulfur metabolism |
11 |
| Glycan Biosynthesis and Metabolism |
309 |
| Chondroitin sulfate biosynthesis |
0 |
| Glycosaminoglycan degradation |
13 |
| Glycosphingolipid biosynthesis - ganglio series |
43 |
| Glycosphingolipid biosynthesis - globo series |
20 |
| Glycosphingolipid biosynthesis - lacto and neolacto series |
19 |
| Glycosylphosphatidylinositol(GPI)-anchor biosynthesis |
40 |
| Heparan sulfate biosynthesis |
0 |
| High-mannose type N-glycan biosynthesis |
21 |
| Keratan sulfate biosynthesis |
19 |
| Lipopolysaccharide biosynthesis |
209 |
| N-Glycan biosynthesis |
42 |
| O-Glycan biosynthesis |
19 |
| O-Mannosyl glycan biosynthesis |
30 |
| Other glycan degradation |
33 |
| Peptidoglycan biosynthesis |
29 |
| Lipid Metabolism |
332 |
| alpha-Linolenic acid metabolism |
11 |
| Arachidonic acid metabolism |
31 |
| Biosynthesis of unsaturated fatty acids |
47 |
| C21-Steroid hormone metabolism |
1 |
| Ether lipid metabolism |
102 |
| Fatty acid biosynthesis |
23 |
| Fatty acid elongation in mitochondria |
5 |
| Fatty acid metabolism |
20 |
| Glycerolipid metabolism |
64 |
| Glycerophospholipid metabolism |
79 |
| Linoleic acid metabolism |
9 |
| Primary bile acid biosynthesis |
0 |
| Secondary bile acid biosynthesis |
6 |
| Sphingolipid metabolism |
94 |
| Steroid biosynthesis |
9 |
| Synthesis and degradation of ketone bodies |
4 |
| Metabolism of Cofactors and Vitamins |
368 |
| Biotin metabolism |
11 |
| Folate biosynthesis |
82 |
| Lipoic acid metabolism |
0 |
| Nicotinate and nicotinamide metabolism |
103 |
| One carbon pool by folate |
16 |
| Pantothenate and CoA biosynthesis |
52 |
| Porphyrin and chlorophyll metabolism |
17 |
| Retinol metabolism |
42 |
| Riboflavin metabolism |
17 |
| Thiamine metabolism |
13 |
| Ubiquinone and other terpenoid-quinone biosynthesis |
22 |
| Vitamin B6 metabolism |
8 |
| Metabolism of Other Amino Acids |
140 |
| beta-Alanine metabolism |
13 |
| Cyanoamino acid metabolism |
37 |
| D-Alanine metabolism |
0 |
| D-Arginine and D-ornithine metabolism |
0 |
| D-Glutamine and D-glutamate metabolism |
0 |
| Glutathione metabolism |
72 |
| Phosphonate and phosphinate metabolism |
8 |
| Selenoamino acid metabolism |
16 |
| Taurine and hypotaurine metabolism |
5 |
| Nucleotide Metabolism |
739 |
| Purine metabolism |
694 |
| Pyrimidine metabolism |
300 |
| Overview |
346 |
| Biosynthesis of alkaloids derived from histidine and purine |
152 |
| Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid |
125 |
| Biosynthesis of alkaloids derived from shikimate pathway |
127 |
| Biosynthesis of alkaloids derived from terpenoid and polyketide |
90 |
| Biosynthesis of phenylpropanoids |
113 |
| Biosynthesis of plant hormones |
163 |
| Biosynthesis of plant secondary metabolites |
0 |
| Biosynthesis of terpenoids and steroids |
111 |
| Overview of biosynthetic pathways |
0 |
| Xenobiotics Biodegradation and Metabolism |
165 |
| 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation |
1 |
| 1,2-Dichloroethane degradation |
0 |
| 1,4-Dichlorobenzene degradation |
17 |
| 1- and 2-Methylnaphthalene degradation |
48 |
| 2,4-Dichlorobenzoate degradation |
4 |
| 3-Chloroacrylic acid degradation |
4 |
| Atrazine degradation |
1 |
| Benzoate degradation via CoA ligation |
61 |
| Benzoate degradation via hydroxylation |
3 |
| Biphenyl degradation |
1 |
| Bisphenol A degradation |
30 |
| Caprolactam degradation |
20 |
| Carbazole degradation |
0 |
| Drug metabolism - cytochrome P450 |
15 |
| Drug metabolism - other enzymes |
32 |
| Ethylbenzene degradation |
45 |
| Fluorene degradation |
1 |
| Fluorobenzoate degradation |
1 |
| gamma-Hexachlorocyclohexane degradation |
30 |
| Geraniol degradation |
1 |
| Metabolism of xenobiotics by cytochrome P450 |
16 |
| Naphthalene and anthracene degradation |
38 |
| Styrene degradation |
0 |
| Tetrachloroethene degradation |
9 |
| Toluene and xylene degradation |
0 |
| Trinitrotoluene degradation |
6 |
