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Rhizophagus irregularis DAOM 197198 v1.0
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Please note that this organism is for archival use only. Please see the current
Rhizophagus irregularis DAOM197198 v2.0
site for the latest data and information.
TRANSCRIPT ANNOTATION
Rhiir2_1/scaffold_27:458707-459939
estExt_Genemark1.C_270102
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Attribute
Value
Creator
Action
Name
Description
Model Notes
Defline
hypothetical protein
AUTOMATIC
Disposition
Catalog
AUTOMATIC
Literature
Assessment
?
Note
Creator
Action
EST evidence
Needs GO
Evidence
Type
Creator
Action
FUNCTIONAL (PROTEIN) ANNOTATION
User-Assigned Ontology
ASPECT
DETAILS
function
 
 
process
 
 
component
 
 
enzyme
 
 
kog
 
 
Automatic Ontology and Best Protein Alignments for transcript 1870182
Automatic Ontology
ASPECT
GO/EC
SUPPORT
Action
function
3824 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
IPR009003 Trypsin-like cysteine/serine peptidase domain
4252 Catalysis of the hydrolysis of nonterminal peptide linkages in oligopeptides or polypeptides by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
IPR018114 Peptidase S1, trypsin family, active site
process
6508 The hydrolysis of a peptide bond or bonds within a protein.
IPR018114 Peptidase S1, trypsin family, active site
High Scoring Alignments
gi|314981681|gb|EFT25774.1|
conserved hypothetical protein [Propionibacterium acnes HL110PA3] >gi|315092320|gb|EFT64296.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4] [no tax name]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
226
1.19679E-10
16%
64%
61%
gi|375129074|ref|YP_004991170.1|
hypothetical protein [Pseudonocardia dioxanivorans CB1190] >gi|326955289|gb|AEA28983.1| hypothetical protein Psed_6915 [Pseudonocardia dioxanivorans CB1190] [no tax name]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
223
2.50497E-10
14%
64%
59%
gi|160931160|ref|ZP_02078566.1|
hypothetical protein CLOLEP_00001 [Clostridium leptum DSM 753] >gi|156869834|gb|EDO63206.1| hypothetical protein CLOLEP_00001, partial [Clostridium leptum DSM 753] [no tax name]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
222
7.88316E-10
15%
47%
61%
gi|282854949|ref|ZP_06264283.1|
conserved hypothetical protein [Propionibacterium acnes J139] >gi|386070352|ref|YP_005985248.1| hypothetical protein [Propionibacterium acnes ATCC 11828] >gi|282582095|gb|EFB87478.1| conserved hypothetical protein [Propionibacterium acnes J139] >gi|353454718|gb|AER05237.1| hypothetical protein TIIST44_03640 [Propionibacterium acnes ATCC 11828] [no tax name]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
222
7.0977E-10
15%
49%
61%
gi|314924433|gb|EFS88264.1|
conserved hypothetical protein [Propionibacterium acnes HL001PA1] >gi|315094684|gb|EFT66660.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1] >gi|327328736|gb|EGE70496.1| putative secreted protein [Propionibacterium acnes HL103PA1] [no tax name]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
222
3.8142E-10
15%
64%
61%
gi|345002962|ref|YP_004805816.1|
hypothetical protein SACTE_5467 [Streptomyces sp. SirexAA-E] >gi|344318588|gb|AEN13276.1| conserved hypothetical protein [Streptomyces sp. SirexAA-E] [no tax name]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
221
6.91939E-10
13%
55%
64%
gi|327309793|ref|YP_004336691.1|
hypothetical protein Psed_6743 [Pseudonocardia dioxanivorans CB1190] >gi|326955128|gb|AEA28824.1| hypothetical protein Psed_6743 [Pseudonocardia dioxanivorans CB1190] [no tax name]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
220
5.21229E-10
14%
71%
60%
gi|386837051|ref|YP_006242109.1|
hypothetical protein [Streptomyces hygroscopicus subsp. jinggangensis 5008] >gi|374097352|gb|AEY86236.1| hypothetical protein SHJG_0959 [Streptomyces hygroscopicus subsp. jinggangensis 5008] [no tax name]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
217
2.37321E-9
12%
56%
65%
gi|340775539|gb|EGR97592.1|
conserved domain protein [Propionibacterium acnes SK182B-JCVI] [no tax name]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
216
4.65975E-9
16%
49%
64%
gi|375290417|ref|YP_005124957.1|
hypothetical protein CD241_0688 [Corynebacterium diphtheriae 241] >gi|376245250|ref|YP_005135489.1| hypothetical protein CDHC01_0688 [Corynebacterium diphtheriae HC01] >gi|376253861|ref|YP_005142320.1| hypothetical protein CDPW8_0759 [Corynebacterium diphtheriae PW8] >gi|371580088|gb|AEX43755.1| hypothetical protein CD241_0688 [Corynebacterium diphtheriae 241] >gi|372107880|gb|AEX73941.1| hypothetical protein CDHC01_0688 [Corynebacterium diphtheriae HC01] >gi|372116945|gb|AEX69415.1| hypothetical protein CDPW8_0759 [Corynebacterium diphtheriae PW8] [no tax name]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
216
4.73622E-6
13%
85%
59%