Rhizophagus irregularis DAOM 197198 v1.0

TRANSCRIPT ANNOTATION

Rhiir2_1/scaffold_23:342845-344457 fgenesh1_kg.23_#_903_#_TRINITY_DN6609_c1_g2_i1 Hide

Attribute

Value

Creator

Action

Name

Description

Model Notes

Defline

Dbl homology (DH) domain-containing protein

AUTOMATIC

Disposition

Catalog

AUTOMATIC

Literature

Assessment

Note

Creator

Action

EST evidence

Needs GO

Evidence

Type

Creator

Action

FUNCTIONAL (PROTEIN) ANNOTATION

User-Assigned Ontology

ASPECT

DETAILS

function

process

component

enzyme

kog

Automatic Ontology and Best Protein Alignments for transcript 1525032

Automatic Ontology

ASPECT

GO/EC

SUPPORT

Action

function

5085 Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase.	IPR001331 Guanine-nucleotide dissociation stimulator, CDC24, conserved site
5089 Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase.	IPR000219 Dbl homology (DH) domain

process

35023 Any process that modulates the frequency, rate or extent of Rho protein signal transduction.

IPR000219 Dbl homology (DH) domain

kog

KOG4305 RhoGEF GTPase
Signal transduction mechanisms

High Scoring Alignments
gi\|392595699\|gb\|EIW85022.1\| Dbl-like domain-containing protein [Coniophora puteana RWD-64-598 SS2] [no tax name] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	474	3.17538E-37	13%	49%	76%

gi\|302691060\|ref\|XP_003035209.1\| hypothetical protein SCHCODRAFT_52191 [Schizophyllum commune H4-8] >gi\|300108905\|gb\|EFJ00307.1\| hypothetical protein SCHCODRAFT_52191 [Schizophyllum commune H4-8] [no tax name] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	466	3.02482E-36	14%	51%	76%

gi\|390598071\|gb\|EIN07470.1\| Dbl domain-containing protein [Punctularia strigosozonata HHB-11173 SS5] [no tax name] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	464	4.63445E-36	12%	56%	75%

gi\|393220329\|gb\|EJD05815.1\| Dbl domain-containing protein [Fomitiporia mediterranea MF3/22] [no tax name] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	459	3.63349E-35	14%	48%	75%

gi\|170087190\|ref\|XP_001874818.1\| predicted protein [Laccaria bicolor S238N-H82] >gi\|164650018\|gb\|EDR14259.1\| predicted protein [Laccaria bicolor S238N-H82] [no tax name] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	456	6.90313E-35	14%	49%	75%

gi\|389748977\|gb\|EIM90154.1\| Dbl-like domain-containing protein [Stereum hirsutum FP-91666 SS1] [no tax name] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	451	3.53675E-34	13%	53%	85%

gi\|392566834\|gb\|EIW60009.1\| Dbl domain-containing protein [Trametes versicolor FP-101664 SS1] [no tax name] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	448	8.36583E-34	13%	50%	75%

gi\|390594662\|gb\|EIN04071.1\| Dbl domain-containing protein [Punctularia strigosozonata HHB-11173 SS5] [no tax name] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	432	8.55055E-32	12%	57%	75%

gi\|331219102\|ref\|XP_003322228.1\| hypothetical protein PGTG_03765 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] >gi\|309301218\|gb\|EFP77809.1\| hypothetical protein PGTG_03765 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] [no tax name] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	424	2.7257E-30	15%	45%	76%

gi\|375171989\|gb\|EHS64509.1\| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL 75-36-700-3] [no tax name] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	424	2.54224E-30	15%	46%	76%