Mucor heterogamus NRRL 1489 v1.0
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Status

The Mucor heterogamus NRRL 1489 genome was sequenced with PacBio, assembled with Falcon, and annotated with the JGI Annotation pipeline.

Summary statistics for the Mucor heterogamus NRRL 1489 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 54.49
Sequencing read coverage depth 285.03x
# of contigs 1219
# of scaffolds 1219
# of scaffolds >= 2Kbp 1183
Scaffold N50 109
Scaffold L50 (Mbp) 0.12
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.91, 0.77, 0.71


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 40755 36488 89.5%
Ests est.fasta 144827003 139716188 96.5%


Gene Models FilteredModels1
length (bp) of: average median
gene 1550 1300
transcript 1225 1006
exon 259 162
intron 89 68
description:
protein length (aa) 366 288
exons per gene 4.73 4
# of gene models 14998


Collaborators

Joey Spatafora, Oregon State, Oregon

Jason Stajich, UC Riverside, California

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.