Info • Aspergillus venezuelensis CBS 868.97 v1.0

Status

[July 2016] The Aspergillus venezuelensis CBS 868.97 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus venezuelensis v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 34.84
Sequencing read coverage depth 64.7x
# of contigs 734
# of scaffolds 715
# of scaffolds >= 2Kbp 509
Scaffold N50 35
Scaffold L50 (Mbp) 0.32
# of gaps 19
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.35, 0.74, 0.66


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 27735 27220 98.1%
Ests est.fasta 47034495 46151000 98.1%


Gene Models FilteredModels1
length (bp) of: average median
gene 1857 1608
transcript 1684 1461
exon 533 322
intron 82 60
description:
protein length (aa) 477 397
exons per gene 3.16 3
# of gene models 12450


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.