Info • Aspergillus insolitus CBS 384.61 v1.0

Status

[May 2016] The Aspergillus insolitus CBS 384.61 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus insolitus v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 23.18
Sequencing read coverage depth 101x
# of contigs 181
# of scaffolds 157
# of scaffolds >= 2Kbp 149
Scaffold N50 20
Scaffold L50 (Mbp) 0.38
# of gaps 24
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.52, 0.82, 0.74


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 21606 19504 90.3%
Ests est.fasta 44562776 25160172 56.5%


Gene Models FilteredModels1
length (bp) of: average median
gene 1894 1641
transcript 1730 1501
exon 532 317
intron 75 57
description:
protein length (aa) 479 402
exons per gene 3.25 3
# of gene models 8834


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.