Info • Aspergillus acristatulus CBS 119.55 v1.0

Status

[May 2016] The Aspergillus acristatulus CBS 119.55 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus acristatulus v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 32.59
Sequencing read coverage depth 76.5x
# of contigs 371
# of scaffolds 311
# of scaffolds >= 2Kbp 233
Scaffold N50 19
Scaffold L50 (Mbp) 0.47
# of gaps 60
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 2.02, 1.43, 1.29


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 33882 33028 97.5%
Ests est.fasta 43720440 42076231 96.2%


Gene Models FilteredModels1
length (bp) of: average median
gene 1864 1623
transcript 1693 1467
exon 534 315
intron 81 60
description:
protein length (aa) 482 403
exons per gene 3.17 3
# of gene models 11221


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.